C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GLI-Kruppel family member GLI3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130535 Gli3-002 ENSMUSG00000021318 10090 + 13:15463723-15663518 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverOvaryENSMUST00000130535
Transcript ID Adrenal Breast Colon Kidney Liver Ovary
ENSMUST00000130535 0.440±0.06 0.633±0.03 0.593±0.10 0.094±0.01 0.039±0.01 0.723±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FY CIL_0008FY_0002 VISTA 13:15001053-15602135
CIL_0009D0 CIL_0009D0_0002 VISTA 13:15185450-15787168
CIL_0008NK CIL_0008NK_0002 VISTA 13:15243030-15845007
CIL_0007V6 CIL_0007V6_0002 VISTA 13:15248974-15850833
CIL_0008OL CIL_0008OL_0002 VISTA 13:15364354-15965305

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000395925 GLI3-001 protein_coding Homo_sapiens 0 1864
ENST00000448703 GLI3-005 protein_coding Homo_sapiens 0 689
ENST00000479210 GLI3-002 processed_transcript Homo_sapiens 0 1720

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