C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130553 Chst9-001 ENSMUSG00000047161 10090 - 18:15451924-15760157 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverOvaryPlacentaTestisENSMUST00000130553
Transcript ID Brain Breast Liver Ovary Placenta Testis
ENSMUST00000130553 0.118±0.00 0.032±0.00 0.009±0.00 0.369±0.20 0.044±0.03 0.071±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EP CIL_0006EP_0002 CGP 18:15389394-15760157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001537 IDA N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284224 CHST9-201 protein_coding Homo_sapiens 0 1096
ENST00000580774 CHST9-003 protein_coding Homo_sapiens 0 1096
ENST00000581714 CHST9-002 protein_coding Homo_sapiens 0 1096
ENST00000618847 CHST9-001 protein_coding Homo_sapiens 0 1096

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