C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130620 Sec22b-004 ENSMUSG00000027879 10090 + 3:97901225-97907664 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungOvaryENSMUST00000130620
Transcript ID Adrenal Breast Colon Kidney Lung Ovary
ENSMUST00000130620 22.186±4.03 12.957±3.64 15.963±4.43 5.933±0.67 10.948±0.00 21.063±4.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000578049 SEC22B-001 protein_coding Homo_sapiens 0 289
ENST00000616023 CH17-478G19.2-001 unprocessed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000618702 SEC22B-001 unprocessed_pseudogene Homo_sapiens 4.06377e-44 182

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