C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eva-1 homolog C (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130868 Eva1c-005 ENSMUSG00000039903 10090 + 16:90830808-90905109 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonHeartLiverMuscleOvaryPlacentaENSMUST00000130868
Transcript ID Adipose Adrenal Bladder Colon Heart Liver Muscle Ovary Placenta
ENSMUST00000130868 0.520±0.00 0.931±0.61 0.609±0.00 0.226±0.00 0.101±0.00 0.056±0.00 0.059±0.00 0.420±0.13 0.414±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KX CIL_0003KX_0002 CGP 16:90751527-90905109
CIL_0008TI CIL_0008TI_0002 VISTA 16:90804484-91407069

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300255 EVA1C-001 protein_coding Homo_sapiens 0 375
ENST00000382699 EVA1C-002 protein_coding Homo_sapiens 0 375
ENST00000401402 EVA1C-013 protein_coding Homo_sapiens 0 894
ENST00000412833 EVA1C-008 protein_coding Homo_sapiens 0 375
ENST00000435323 EVA1C-005 nonsense_mediated_decay Homo_sapiens 0 1140
ENST00000437338 EVA1C-007 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000464037 EVA1C-003 retained_intron Homo_sapiens 0 375
ENST00000469079 EVA1C-004 retained_intron Homo_sapiens 0 375

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