C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eva-1 homolog C (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039903 Eva1c 10090 + 16:90826719-90905109 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037539 Eva1c-001 90831113-90904695 protein_coding
  ENSMUST00000099543 Eva1c-002 90831113-90904695 protein_coding
  ENSMUST00000099548 Eva1c-003 90826719-90904695 protein_coding
  ENSMUST00000130868 Eva1c-005 90830808-90905109 nonsense_mediated_decay
  ENSMUST00000138064 Eva1c-004 90826719-90829608 processed_transcript
  ENSMUST00000152223 Eva1c-007 90830867-90904653 nonsense_mediated_decay
  ENSMUST00000154180 Eva1c-006 90846398-90890615 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037539ENSMUST00000099543ENSMUST00000099548ENSMUST00000130868ENSMUST00000138064ENSMUST00000152223ENSMUST00000154180
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037539 2.192±1.50 1.402±0.66 3.297±0.22 0.400±0.19 0.856±0.19 0.323±0.13 0.307±0.05 2.441±0.56 0.103±0.07 2.068±1.08 0.172±0.00 1.698±0.71 1.623±0.48 8.234±2.07
ENSMUST00000099543 0.302±0.07 0.871±0.17 N/A 1.056±0.00 0.675±0.00 0.150±0.03 0.213±0.00 N/A 0.078±0.03 1.576±0.51 0.107±0.08 1.740±0.79 2.960±0.10 3.035±0.00
ENSMUST00000099548 N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A 0.053±0.00 N/A N/A N/A N/A N/A
ENSMUST00000130868 0.520±0.00 0.931±0.61 0.609±0.00 N/A N/A 0.226±0.00 0.101±0.00 N/A 0.056±0.00 N/A 0.059±0.00 0.420±0.13 0.414±0.00 N/A
ENSMUST00000138064 N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A 8.738±0.31
ENSMUST00000152223 0.638±0.37 0.872±0.28 1.806±0.56 0.418±0.16 0.277±0.03 0.410±0.15 0.168±0.03 0.693±0.21 0.087±0.04 2.867±0.84 0.061±0.00 1.510±0.92 0.932±0.53 2.829±0.00
ENSMUST00000154180 N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A 0.054±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KX CIL_0003KX_0002 CGP 16:90751527-90905109
CIL_0008TI CIL_0008TI_0002 VISTA 16:90804484-91407069

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056024 eva1c eva-1 homolog C (C. elegans) protein_coding Danio_rerio
ENSG00000166979 EVA1C eva-1 homolog C (C. elegans) protein_coding Homo_sapiens

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