C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003KX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142207-ENSG00000166979 CGP 9606 21:32311018-32515397
GeneTranscriptPositionBiotype
ENSG00000142207 (URB1)
URB1 ribosome biogenesis 1 homolog (S. cerevisiae) 		ENST00000382751 (URB1-001) 32311018-32393026 protein_coding
ENST00000480196 (URB1-002) 32333113-32334334 retained_intron
ENST00000492603 (URB1-003) 32334209-32335630 processed_transcript
ENSG00000166979 (EVA1C)
eva-1 homolog C (C. elegans) 		ENST00000300255 (EVA1C-001) 32412381-32515389 protein_coding
ENST00000382699 (EVA1C-002) 32412702-32515389 protein_coding
ENST00000401402 (EVA1C-013) 32412685-32515397 protein_coding
ENST00000412833 (EVA1C-008) 32428334-32495137 protein_coding
ENST00000435323 (EVA1C-005) 32412437-32515389 nonsense_mediated_decay
ENST00000437338 (EVA1C-007) 32412437-32515389 nonsense_mediated_decay
ENST00000457807 (EVA1C-006) 32412553-32515389 nonsense_mediated_decay
ENST00000459833 (EVA1C-009) 32412042-32501455 processed_transcript
ENST00000464037 (EVA1C-003) 32452185-32515389 retained_intron
ENST00000469079 (EVA1C-004) 32412006-32468055 retained_intron
ENST00000481638 (EVA1C-010) 32412764-32433284 processed_transcript
ENST00000485488 (EVA1C-012) 32495117-32515389 processed_transcript
ENST00000496615 (EVA1C-011) 32493653-32514880 processed_transcript
ENSG00000200792 (SNORA80A)
small nucleolar RNA, H/ACA box 80A 		ENST00000363922 (SNORA80A-201) 32377187-32377322 snoRNA
ENSG00000229007 (EXOSC3P1)
exosome component 3 pseudogene 1 		ENST00000448649 (EXOSC3P1-001) 32496812-32497311 processed_pseudogene
ENSG00000256073 (C21orf119)
URB1 antisense RNA 1 (head to head) 		ENST00000534991 (C21orf119-001) 32393130-32393960 lincRNA
CIL_0003KX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039929-ENSMUSG00000039903 CGP 10090 16:90751527-90905109
GeneTranscriptPositionBiotype
ENSMUSG00000039903 (Eva1c)
eva-1 homolog C (C. elegans) 		ENSMUST00000037539 (Eva1c-001) 90831113-90904695 protein_coding
ENSMUST00000099543 (Eva1c-002) 90831113-90904695 protein_coding
ENSMUST00000099548 (Eva1c-003) 90826719-90904695 protein_coding
ENSMUST00000130868 (Eva1c-005) 90830808-90905109 nonsense_mediated_decay
ENSMUST00000138064 (Eva1c-004) 90826719-90829608 processed_transcript
ENSMUST00000152223 (Eva1c-007) 90830867-90904653 nonsense_mediated_decay
ENSMUST00000154180 (Eva1c-006) 90846398-90890615 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KX_0001ENSG00000142207ENST00000382751ENST00000480196ENST00000492603ENSG00000166979ENST00000300255ENST00000382699ENST00000401402ENST00000412833ENST00000435323ENST00000437338ENST00000457807ENST00000459833ENST00000464037ENST00000469079ENST00000481638ENST00000485488ENST00000496615ENSG00000200792ENST00000363922ENSG00000229007ENST00000448649ENSG00000256073ENST00000534991CIL_0003KX_0002ENSMUSG00000039903ENSMUST00000037539ENSMUST00000099543ENSMUST00000099548ENSMUST00000130868ENSMUST00000138064ENSMUST00000152223ENSMUST00000154180
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KX_0001ENSG00000142207ENST00000382751ENSG00000166979ENST00000300255ENST00000382699ENST00000401402ENST00000412833ENST00000437338ENST00000457807ENST00000459833ENST00000464037ENST00000469079ENST00000481638ENST00000485488ENSG00000200792ENST00000363922ENSG00000229007ENST00000448649ENSG00000256073ENST00000534991CIL_0003KX_0002ENSMUSG00000039903ENSMUST00000037539ENSMUST00000099543ENSMUST00000099548ENSMUST00000130868ENSMUST00000138064ENSMUST00000152223ENSMUST00000154180
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142207 ENST00000382751 3.152±0.00 3.013±0.00 N/A 1.972±1.24 3.967±2.08 1.405±1.05 1.682±1.11 1.653±0.66 1.116±0.28 2.003±0.00 3.004±2.25 7.365±2.12 1.985±0.70 4.024±0.01
ENST00000480196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166979 ENST00000300255 N/A N/A N/A N/A N/A N/A N/A 1.669±0.00 1.220±0.00 N/A N/A 3.420±0.00 3.397±0.25 N/A
ENST00000382699 4.693±0.00 N/A N/A N/A N/A 1.968±0.00 2.168±0.00 N/A 0.483±0.00 8.265±0.00 0.852±0.43 2.306±0.00 2.629±0.00 4.112±0.00
ENST00000401402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.253±0.00 N/A N/A N/A
ENST00000412833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.708±0.00 N/A N/A
ENST00000435323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437338 4.857±0.00 10.004±0.00 N/A 4.345±0.00 4.729±0.00 3.944±0.00 3.178±0.00 1.767±0.00 0.789±0.00 13.003±0.00 2.989±0.00 3.273±1.20 3.022±0.36 4.507±0.00
ENST00000457807 N/A N/A N/A 0.182±0.00 N/A 1.299±1.12 1.753±0.00 1.616±0.00 N/A 0.786±0.00 N/A 2.957±0.00 N/A 3.025±0.00
ENST00000459833 N/A N/A 0.212±0.00 N/A N/A N/A N/A 0.194±0.00 N/A N/A 1.571±0.00 N/A N/A N/A
ENST00000464037 N/A N/A 0.070±0.00 1.826±0.00 N/A 0.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469079 N/A N/A 0.224±0.00 0.395±0.00 N/A N/A N/A N/A N/A 0.632±0.00 N/A N/A N/A N/A
ENST00000481638 N/A N/A N/A N/A 6.140±0.00 N/A N/A 2.334±0.00 N/A N/A N/A N/A N/A N/A
ENST00000485488 13.934±0.00 33.577±0.00 N/A 5.807±5.39 13.821±0.00 5.513±0.00 N/A 2.570±0.00 1.058±0.00 11.949±0.00 N/A 11.012±4.46 10.209±6.39 13.992±1.63
ENST00000496615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200792 ENST00000363922 0.355±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.256±1.98 0.651±0.00 N/A
ENSG00000229007 ENST00000448649 0.090±0.00 0.761±0.00 0.227±0.00 0.513±0.08 0.201±0.13 0.603±0.25 0.173±0.09 0.521±0.16 0.836±0.57 0.848±0.15 N/A 0.398±0.28 0.303±0.10 0.814±0.78
ENSG00000256073 ENST00000534991 3.783±0.00 2.947±0.00 0.408±0.00 2.632±1.40 1.216±0.85 1.241±0.47 2.069±1.67 2.741±0.61 1.113±0.75 1.876±0.00 1.334±1.05 2.623±1.99 1.841±0.93 3.872±1.65
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039903 ENSMUST00000037539 2.192±1.50 1.402±0.66 3.297±0.22 0.400±0.19 0.856±0.19 0.323±0.13 0.307±0.05 2.441±0.56 0.103±0.07 2.068±1.08 0.172±0.00 1.698±0.71 1.623±0.48 8.234±2.07
ENSMUST00000099543 0.302±0.07 0.871±0.17 N/A 1.056±0.00 0.675±0.00 0.150±0.03 0.213±0.00 N/A 0.078±0.03 1.576±0.51 0.107±0.08 1.740±0.79 2.960±0.10 3.035±0.00
ENSMUST00000099548 N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A 0.053±0.00 N/A N/A N/A N/A N/A
ENSMUST00000130868 0.520±0.00 0.931±0.61 0.609±0.00 N/A N/A 0.226±0.00 0.101±0.00 N/A 0.056±0.00 N/A 0.059±0.00 0.420±0.13 0.414±0.00 N/A
ENSMUST00000138064 N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A 8.738±0.31
ENSMUST00000152223 0.638±0.37 0.872±0.28 1.806±0.56 0.418±0.16 0.277±0.03 0.410±0.15 0.168±0.03 0.693±0.21 0.087±0.04 2.867±0.84 0.061±0.00 1.510±0.92 0.932±0.53 2.829±0.00
ENSMUST00000154180 N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A 0.054±0.00 N/A N/A N/A N/A N/A

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