C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: AT rich interactive domain 3A (BRIGHT-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131118 Arid3a-005 ENSMUSG00000019564 10090 + 10:79930424-79931218 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverOvaryTestisENSMUST00000131118
Transcript ID Adrenal Liver Ovary Testis
ENSMUST00000131118 2.603±0.66 0.395±0.08 3.026±0.11 12.382±1.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0000I3 CIL_0000I3_0002 CGP 10:79916971-79955018
CIL_0004VT CIL_0004VT_0002 CGP 10:79927043-79969246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0042803 IPI protein homodimerization activity
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter

Homologs

No Homologs available.

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