C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pogo transposable element with KRAB domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131487 Pogk-002 ENSMUSG00000040596 10090 - 1:166393610-166409391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverMuscleOvaryPlacentaTestisENSMUST00000131487
Transcript ID Adrenal Liver Muscle Ovary Placenta Testis
ENSMUST00000131487 2.045±0.00 0.618±0.00 0.424±0.00 3.306±0.73 0.694±0.30 0.398±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367874 TADA1-001 protein_coding Homo_sapiens 0 387
ENST00000367875 POGK-003 protein_coding Homo_sapiens 0 2130
ENST00000367876 POGK-001 protein_coding Homo_sapiens 0 2089
ENST00000449930 POGK-002 protein_coding Homo_sapiens 0 684
ENST00000467021 TADA1-002 processed_transcript Homo_sapiens 0 387

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