C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131556 Arfgef1-001 ENSMUSG00000067851 10090 - 1:10173075-10232670 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000131556
Transcript ID Breast
ENSMUST00000131556 2.567±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001S0 CIL_0001S0_0003 CGP 1:10037987-10232670
CIL_0005BT CIL_0005BT_0003 CGP 1:10137571-10719945

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005802 IBA trans-Golgi network
GO:0016192 IBA vesicle-mediated transport
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262215 ARFGEF1-001 protein_coding Homo_sapiens 0 4525
ENST00000519436 ARFGEF1-002 protein_coding Homo_sapiens 0 566
ENST00000520381 ARFGEF1-003 protein_coding Homo_sapiens 0 2237

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