C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | neurofibromatosis 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000131800  |
Nf1-004 |
ENSMUSG00000020716 |
10090 | + |
11:79339887-79430788  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007SM | CIL_0007SM_0002 | VISTA | 11:78750979-79355443 |
| CIL_0004GN | CIL_0004GN_0003 | CGP | 11:79339693-79581612 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000356175
|
NF1-002 | protein_coding | Homo_sapiens | 0 | 2392 |
|
ENST00000358273
|
NF1-001 | protein_coding | Homo_sapiens | 0 | 2392 |
|
ENST00000431387
|
NF1-010 | protein_coding | Homo_sapiens | 0 | 2392 |
|
ENST00000456735
|
NF1-003 | protein_coding | Homo_sapiens | 0 | 911 |
|
ENST00000457709
|
NF1P3-001 | unprocessed_pseudogene | Homo_sapiens | 0 | 448 |
|
ENST00000487476
|
NF1-004 | retained_intron | Homo_sapiens | 0 | 2412 |
|
ENST00000489712
|
NF1-023 | protein_coding | Homo_sapiens | 0 | 737 |
|
ENST00000490416
|
NF1-011 | retained_intron | Homo_sapiens | 0 | 416 |
|
ENST00000495910
|
NF1-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 1465 |
|
ENST00000579081
|
NF1-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 2392 |
|
ENST00000588287
|
NF1P5-001 | processed_pseudogene | Homo_sapiens | 0 | 411 |
