C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurofibromin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495910 NF1-006 ENSG00000196712 9606 + 17:31156041-31254292 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryENST00000495910
Transcript ID Breast Colon Ovary
ENST00000495910 2.418±0.00 2.254±0.00 3.530±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GN CIL_0004GN_0002 CGP 17:31094927-31382116

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071325 Nf1-001 protein_coding Mus_musculus 0 4654
ENSMUST00000108251 Nf1-003 protein_coding Mus_musculus 0 4654
ENSMUST00000131800 Nf1-004 retained_intron Mus_musculus 0 1465
ENSMUST00000130979 Nf1-008 processed_transcript Mus_musculus 0 784
ENSMUST00000122917 Nf1-002 processed_transcript Mus_musculus 0 784

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