C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131814 Taf13-002 ENSMUSG00000048100 10090 + 3:108571698-108581370 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungOvaryTestisENSMUST00000131814
Transcript ID Breast Colon Lung Ovary Testis
ENSMUST00000131814 1.954±0.00 1.588±0.00 1.093±0.00 1.113±0.29 5.980±2.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338366 TAF13-002 protein_coding Homo_sapiens 0 488
ENST00000461096 TAF13-001 nonsense_mediated_decay Homo_sapiens 0 488

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