C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tenascin N
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000239462 TNN-001 ENSG00000120332 9606 + 1:175067858-175148066 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000239462
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000239462 2.003±0.00 0.026±0.00 0.064±0.00 1.693±1.24 0.358±0.00 0.044±0.03 0.140±0.03 0.074±0.00 0.029±0.00 0.042±0.00 0.162±0.00 0.023±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005178 IEA integrin binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005578 IEA proteinaceous extracellular matrix
GO:0007160 IEA cell-matrix adhesion
GO:0007409 IEA axonogenesis
GO:0009986 IEA cell surface
GO:0016049 ISS cell growth
GO:0016477 ISS cell migration
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131919 Tnn-002 protein_coding Mus_musculus 0 3518
ENSMUST00000039178 Tnn-001 protein_coding Mus_musculus 0 2495

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