C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hemoglobin, beta adult s chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131960 Hbb-bs-003 ENSMUSG00000052305 10090 - 7:103826535-103827737 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000131960
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000131960 67.236±8.47 248.497±46.29 240.321±0.00 178.009±2.41 124.164±95.43 431.932±352.44 80.866±34.65 4193.925±1246.97 16.697±5.94 43.724±21.34 3297.814±2775.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PR CIL_0007PR_0002 VISTA 7:103558636-104159881
CIL_0003R8 CIL_0003R8_0007 CGP 7:103812524-103828096
CIL_0003R8 CIL_0003R8_0006 CGP 7:103826534-103840427

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292896 HBE1-201 protein_coding Homo_sapiens 0 246
ENST00000330597 HBG1-001 protein_coding Homo_sapiens 0 252
ENST00000335295 HBB-001 protein_coding Homo_sapiens 0 311
ENST00000336906 HBG2-201 protein_coding Homo_sapiens 0 263
ENST00000380237 HBE1-001 protein_coding Homo_sapiens 0 246
ENST00000380252 HBG2-004 protein_coding Homo_sapiens 0 263
ENST00000380259 HBG2-001 protein_coding Homo_sapiens 0 263
ENST00000444587 HBG2-003 processed_transcript Homo_sapiens 0 228
ENST00000475226 HBB-003 retained_intron Homo_sapiens 0 259
ENST00000620888 HBG2-202 protein_coding Homo_sapiens 0 257
ENST00000623781 AC104389.2-201 protein_coding Homo_sapiens 0 219
ENST00000624109 AC104389.1-201 protein_coding Homo_sapiens 0 224

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