C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uridine monophosphate synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131990 Umps-002 ENSMUSG00000022814 10090 - 16:33954794-33967003 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyMuscleOvaryPlacentaTestisENSMUST00000131990
Transcript ID Adipose Adrenal Breast Colon Kidney Muscle Ovary Placenta Testis
ENSMUST00000131990 1.164±0.00 4.213±1.71 1.521±0.92 0.914±0.22 1.405±0.09 0.318±0.14 3.569±2.01 0.519±0.00 1.219±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HE CIL_0008HE_0002 VISTA 16:33792411-34395018

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000232607 UMPS-001 protein_coding Homo_sapiens 0 1048
ENST00000460034 UMPS-006 nonsense_mediated_decay Homo_sapiens 0 1048
ENST00000462091 UMPS-002 nonsense_mediated_decay Homo_sapiens 0 1205
ENST00000467167 UMPS-008 nonsense_mediated_decay Homo_sapiens 0 1048
ENST00000474588 UMPS-004 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000479719 UMPS-009 nonsense_mediated_decay Homo_sapiens 0 451
ENST00000487622 UMPS-013 retained_intron Homo_sapiens 0 442
ENST00000495751 UMPS-012 processed_transcript Homo_sapiens 0 446

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