C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: uridine monophosphate synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022814 Umps 10090 - 16:33954782-33967038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023510 Umps-001 33954782-33967038 protein_coding
  ENSMUST00000131990 Umps-002 33954794-33967003 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023510ENSMUST00000131990
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023510 5.695±1.07 5.653±1.57 1.684±0.43 3.551±2.42 3.422±1.44 3.461±1.03 1.702±0.17 7.207±0.62 5.371±1.68 2.904±0.27 1.376±0.19 8.148±1.95 5.742±4.63 5.308±1.29
ENSMUST00000131990 1.164±0.00 4.213±1.71 N/A N/A 1.521±0.92 0.914±0.22 N/A 1.405±0.09 N/A N/A 0.318±0.14 3.569±2.01 0.519±0.00 1.219±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HE CIL_0008HE_0002 VISTA 16:33792411-34395018

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004588 IEA orotate phosphoribosyltransferase activity
GO:0004590 IEA orotidine-5'-phosphate decarboxylase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006207 IEA 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006222 IEA UMP biosynthetic process
GO:0007565 IEA female pregnancy
GO:0007595 IEA lactation
GO:0035690 IEA cellular response to drug
GO:0044205 IEA 'de novo' UMP biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012215 umps uridine monophosphate synthetase protein_coding Danio_rerio
ENSG00000114491 UMPS uridine monophosphate synthetase protein_coding Homo_sapiens

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