C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uridine monophosphate synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000232607 UMPS-001 ENSG00000114491 9606 + 3:124730366-124745193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000232607
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000232607 0.700±0.00 2.216±0.00 1.102±0.59 1.593±0.00 0.628±0.00 0.468±0.06 3.261±0.13 2.607±0.01 0.845±0.00 0.141±0.00 4.114±1.65 2.660±0.44 1.358±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HE CIL_0008HE_0001 VISTA 3:124285853-124889070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004588 IDA:IEA orotate phosphoribosyltransferase activity
GO:0004590 IDA:IEA orotidine-5'-phosphate decarboxylase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0006207 IEA 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006222 IDA UMP biosynthetic process
GO:0007565 IEA female pregnancy
GO:0007595 IEA lactation
GO:0008152 IEA metabolic process
GO:0009116 IEA nucleoside metabolic process
GO:0035690 IEA cellular response to drug
GO:0044205 IEA 'de novo' UMP biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0046134 TAS pyrimidine nucleoside biosynthetic process
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023510 Umps-001 protein_coding Mus_musculus 0 1373
ENSMUST00000131990 Umps-002 nonsense_mediated_decay Mus_musculus 0 1048

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