C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein A-I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132155 Apoa1-002 ENSMUSG00000032083 10090 + 9:46228721-46229973 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000132155
Transcript ID Ovary Placenta Testis
ENSMUST00000132155 9.831±7.88 198.944±198.55 0.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0002 VISTA 9:45818249-46421546
CIL_0008EK CIL_0008EK_0002 VISTA 9:46081147-46681838

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236850 APOA1-001 protein_coding Homo_sapiens 0 287
ENST00000359492 APOA1-004 protein_coding Homo_sapiens 0 287
ENST00000375320 APOA1-002 protein_coding Homo_sapiens 0 285
ENST00000375323 APOA1-003 protein_coding Homo_sapiens 0 302

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