C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | splicing factor 3a, subunit 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000132666  |
Sf3a1-004 |
ENSMUSG00000002129 |
10090 | + |
11:4160355-4171913  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003VN | CIL_0003VN_0002 | CGP | 11:4141123-4182541 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000215793
|
SF3A1-001 | protein_coding | Homo_sapiens | 0 | 1035 |
|
ENST00000338306
|
CCDC157-201 | protein_coding | Homo_sapiens | 1e-30 | 139 |
|
ENST00000399824
|
CCDC157-002 | protein_coding | Homo_sapiens | 9e-31 | 139 |
|
ENST00000405659
|
CCDC157-001 | protein_coding | Homo_sapiens | 1e-30 | 139 |
|
ENST00000411423
|
SF3A1-004 | nonsense_mediated_decay | Homo_sapiens | 4e-34 | 148 |
|
ENST00000447376
|
SF3A1-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 261 |
|
ENST00000463818
|
SF3A1-003 | retained_intron | Homo_sapiens | 0 | 553 |
|
ENST00000471037
|
SF3A1-006 | retained_intron | Homo_sapiens | 0 | 455 |
|
ENST00000471342
|
SF3A1-005 | retained_intron | Homo_sapiens | 0 | 612 |
|
ENST00000496189
|
SF3A1-002 | retained_intron | Homo_sapiens | 0 | 259 |
