C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: speckle-type POZ protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132827 Spopl-002 ENSMUSG00000026771 10090 - 2:23511270-23571978 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryENSMUST00000132827
Transcript ID Adrenal Breast Colon Ovary
ENSMUST00000132827 1.270±0.09 1.088±0.00 0.922±0.00 2.040±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QJ CIL_0000QJ_0002 CGP 2:23321246-23572106
CIL_0000QI CIL_0000QI_0002 CGP 2:23506220-24049394

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280098 SPOPL-001 protein_coding Homo_sapiens 0 1029
ENST00000420679 SPOPL-002 nonsense_mediated_decay Homo_sapiens 0 1857
ENST00000430968 SPOPL-003 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000467775 SPOPL-004 retained_intron Homo_sapiens 0 315
ENST00000504736 RP11-468N14.6-001 processed_pseudogene Homo_sapiens 0 586
ENST00000506559 RP13-644M16.1-001 processed_pseudogene Homo_sapiens 0 765
ENST00000509604 RP11-468N14.11-001 processed_pseudogene Homo_sapiens 0 809

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