C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dpy-19-like 2 (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133010 Dpy19l2-201 ENSMUSG00000085576 10090 - 9:24557048-24696293 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000133010
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000133010 0.258±0.06 0.081±0.04 0.017±0.00 0.019±0.01 0.019±0.01 0.019±0.01 0.099±0.03 0.092±0.07 0.052±0.04 39.940±13.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000552 CIL_000552_0002 CGP 9:24411776-24696293
CIL_0008SV CIL_0008SV_0002 VISTA 9:24420490-25021595
CIL_0008SU CIL_0008SU_0002 VISTA 9:24437085-25037801
CIL_00091I CIL_00091I_0002 VISTA 9:24448244-25049108
CIL_00091J CIL_00091J_0002 VISTA 9:24454514-25055359
CIL_00091K CIL_00091K_0002 VISTA 9:24489002-25089893
CIL_00091G CIL_00091G_0002 VISTA 9:24502515-25103444
CIL_0008SW CIL_0008SW_0002 VISTA 9:24511552-25112154
CIL_00091H CIL_00091H_0002 VISTA 9:24533559-25134351

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005637 IDA nuclear inner membrane
GO:0007275 IEA multicellular organismal development
GO:0007286 IMP spermatid development
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306389 DPY19L2-002 nonsense_mediated_decay Homo_sapiens 0 665
ENST00000310974 DPY19L1-001 protein_coding Homo_sapiens 0 747
ENST00000312132 DPY19L2P2-002 processed_transcript Homo_sapiens 0 1775
ENST00000324472 DPY19L2-001 protein_coding Homo_sapiens 0 2183
ENST00000411491 DPY19L2P2-001 processed_transcript Homo_sapiens 0 1014
ENST00000413230 DPY19L2-003 retained_intron Homo_sapiens 0 741
ENST00000414296 DPY19L2P3-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 881
ENST00000417811 DPY19L1P1-001 unprocessed_pseudogene Homo_sapiens 0 303
ENST00000435536 DPY19L2P2-006 transcribed_unprocessed_pseudogene Homo_sapiens 0 1905
ENST00000438364 DPY19L2P2-003 processed_transcript Homo_sapiens 0 928
ENST00000439061 DPY19L2-008 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000439473 DPY19L2P2-005 processed_transcript Homo_sapiens 0 1221
ENST00000446373 DPY19L2P2-004 retained_intron Homo_sapiens 4e-31 141
ENST00000454445 DPY19L2P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 309
ENST00000458672 DPY19L2P1-003 processed_transcript Homo_sapiens 0 728
ENST00000481923 DPY19L1-002 processed_transcript Homo_sapiens 0 248
ENST00000536494 DPY19L2-004 retained_intron Homo_sapiens 0 335
ENST00000538147 DPY19L2-006 protein_coding Homo_sapiens 0 298
ENST00000541083 DPY19L2-007 protein_coding Homo_sapiens 0 348

Loading