C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008SV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs470 VISTA 9606 7:34897251-35498313
GeneTranscriptPositionBiotype
ENSG00000164532 (TBX20)
T-box 20 		ENST00000408931 (TBX20-001) 35202430-35254147 protein_coding
ENST00000492961 (TBX20-002) 35231500-35253631 retained_intron
ENSG00000173852 (DPY19L1)
dpy-19-like 1 (C. elegans) 		ENST00000310974 (DPY19L1-001) 34928876-35038041 protein_coding
ENST00000428054 (DPY19L1-008) 34931568-34939368 protein_coding
ENST00000446375 (DPY19L1-005) 34945683-34973605 protein_coding
ENST00000462134 (DPY19L1-004) 34955329-34988234 processed_transcript
ENST00000463538 (DPY19L1-003) 34973513-35000702 processed_transcript
ENST00000481923 (DPY19L1-002) 35010468-35038271 processed_transcript
ENST00000493989 (DPY19L1-006) 34954546-34955367 retained_intron
ENST00000612226 (DPY19L1-201) 34931400-34939237 protein_coding
ENSG00000189212 (DPY19L2P1)
DPY19L2 pseudogene 1 		ENST00000436258 (DPY19L2P1-002) 35089844-35107734 processed_transcript
ENST00000454445 (DPY19L2P1-001) 35081593-35186041 transcribed_unprocessed_pseudogene
ENST00000458672 (DPY19L2P1-003) 35079989-35162075 processed_transcript
ENSG00000226063 (AC009531.2)
 ENST00000442323 (AC009531.2-001) 35258381-35259729 lincRNA
ENSG00000236592 (S100A11P2)
S100 calcium binding protein A11 pseudogene 2 		ENST00000467589 (S100A11P2-001) 35169224-35169535 processed_pseudogene
CIL_0008SV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs470 VISTA 10090 9:24420490-25021595
GeneTranscriptPositionBiotype
ENSMUSG00000031965 (Tbx20)
T-box 20 		ENSMUST00000052946 (Tbx20-201) 24720812-24774303 protein_coding
ENSMUST00000166018 (Tbx20-202) 24740256-24774303 protein_coding
ENSMUSG00000043067 (Dpy19l1)
dpy-19-like 1 (C. elegans) 		ENSMUST00000115277 (Dpy19l1-001) 24411776-24487914 protein_coding
ENSMUST00000129048 (Dpy19l1-005) 24481977-24497172 processed_transcript
ENSMUST00000142064 (Dpy19l1-002) 24411778-24503140 protein_coding
ENSMUST00000149001 (Dpy19l1-004) 24422289-24426418 retained_intron
ENSMUST00000152480 (Dpy19l1-003) 24412051-24423959 retained_intron
ENSMUST00000170356 (Dpy19l1-201) 24411803-24503140 protein_coding
ENSMUSG00000047995 (Cypt4)
cysteine-rich perinuclear theca 4 		ENSMUST00000053956 (Cypt4-201) 24625185-24625827 protein_coding
ENSMUSG00000085576 (Dpy19l2)
dpy-19-like 2 (C. elegans) 		ENSMUST00000133010 (Dpy19l2-201) 24557048-24696293 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008SV_0001ENSG00000164532ENST00000408931ENST00000492961ENSG00000173852ENST00000310974ENST00000428054ENST00000446375ENST00000462134ENST00000463538ENST00000481923ENST00000493989ENST00000612226ENSG00000189212ENST00000436258ENST00000454445ENST00000458672ENSG00000226063ENST00000442323ENSG00000236592ENST00000467589CIL_0008SV_0002ENSMUSG00000031965ENSMUST00000052946ENSMUST00000166018ENSMUSG00000043067ENSMUST00000115277ENSMUST00000129048ENSMUST00000142064ENSMUST00000149001ENSMUST00000152480ENSMUST00000170356ENSMUSG00000047995ENSMUST00000053956ENSMUSG00000085576ENSMUST00000133010
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008SV_0001ENSG00000164532ENST00000408931ENST00000492961ENSG00000173852ENST00000310974ENST00000612226ENSG00000189212ENST00000436258ENST00000454445ENST00000458672ENSG00000226063ENST00000442323ENSG00000236592ENST00000467589CIL_0008SV_0002ENSMUSG00000031965ENSMUST00000052946ENSMUST00000166018ENSMUSG00000043067ENSMUST00000115277ENSMUST00000142064ENSMUST00000152480ENSMUST00000170356ENSMUSG00000047995ENSMUST00000053956ENSMUSG00000085576ENSMUST00000133010
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164532 ENST00000408931 N/A N/A N/A N/A N/A N/A 3.811±1.42 N/A 0.024±0.00 N/A N/A N/A 0.429±0.30 0.319±0.08
ENST00000492961 N/A N/A N/A N/A N/A N/A 1.702±0.00 N/A 0.658±0.65 0.270±0.00 N/A N/A 0.280±0.13 N/A
ENSG00000173852 ENST00000310974 2.299±0.00 2.310±0.00 N/A 5.968±0.00 1.333±0.00 1.849±0.00 2.832±0.76 1.468±0.00 1.555±0.00 2.450±0.00 0.289±0.19 1.361±0.81 5.928±3.44 10.060±3.99
ENST00000428054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.181±0.00 N/A N/A N/A
ENSG00000189212 ENST00000436258 0.149±0.00 0.226±0.00 1.658±0.00 0.976±0.63 0.364±0.00 0.355±0.27 4.050±1.26 0.359±0.27 1.122±0.00 0.161±0.13 0.149±0.13 0.723±0.66 0.086±0.02 2.493±1.89
ENST00000454445 N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A 0.031±0.00 2.069±0.00
ENST00000458672 N/A N/A N/A 0.103±0.00 N/A 0.019±0.00 1.244±0.00 N/A N/A N/A N/A N/A 0.085±0.00 3.976±3.12
ENSG00000226063 ENST00000442323 N/A N/A N/A N/A N/A N/A 0.194±0.00 N/A N/A N/A N/A N/A 0.131±0.00 N/A
ENSG00000236592 ENST00000467589 N/A N/A N/A 0.235±0.00 N/A N/A 0.816±0.00 0.335±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031965 ENSMUST00000052946 0.016±0.00 5.019±0.48 6.144±0.05 0.276±0.15 0.006±0.00 N/A 19.635±1.34 0.029±0.02 0.570±0.07 1.141±0.27 0.011±0.00 0.024±0.02 2.120±1.81 0.011±0.01
ENSMUST00000166018 N/A N/A N/A N/A N/A N/A N/A 0.025±0.02 N/A N/A N/A 0.011±0.00 N/A N/A
ENSMUSG00000043067 ENSMUST00000115277 N/A 11.738±0.00 N/A N/A N/A 1.563±0.00 N/A N/A 3.361±0.28 1.712±0.00 N/A 5.855±2.02 N/A N/A
ENSMUST00000129048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142064 3.209±0.48 9.827±0.00 5.241±0.09 11.590±4.11 4.728±1.97 N/A 1.138±0.15 1.449±0.17 6.134±2.19 2.130±0.49 0.481±0.06 6.920±2.90 3.477±1.05 5.422±1.71
ENSMUST00000149001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152480 N/A N/A N/A 3.425±0.70 N/A N/A N/A N/A N/A 0.876±0.00 N/A N/A N/A N/A
ENSMUST00000170356 6.273±1.44 N/A 3.080±0.37 3.981±0.19 5.066±0.45 N/A 1.358±0.17 1.656±0.09 5.178±2.95 3.033±0.88 0.417±0.11 5.991±1.18 4.832±4.27 2.678±0.63
ENSMUSG00000047995 ENSMUST00000053956 N/A N/A N/A 0.058±0.00 N/A N/A 0.069±0.00 0.076±0.00 N/A N/A N/A N/A 0.010±0.00 247.023±9.32
ENSMUSG00000085576 ENSMUST00000133010 N/A N/A 0.258±0.06 0.081±0.04 0.017±0.00 N/A 0.019±0.01 0.019±0.01 0.019±0.01 0.099±0.03 N/A 0.092±0.07 0.052±0.04 39.940±13.47

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