C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00091I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs466 VISTA 9606 7:34928902-35529768
GeneTranscriptPositionBiotype
ENSG00000164532 (TBX20)
T-box 20 		ENST00000408931 (TBX20-001) 35202430-35254147 protein_coding
ENST00000492961 (TBX20-002) 35231500-35253631 retained_intron
ENSG00000173852 (DPY19L1)
dpy-19-like 1 (C. elegans) 		ENST00000310974 (DPY19L1-001) 34928876-35038041 protein_coding
ENST00000428054 (DPY19L1-008) 34931568-34939368 protein_coding
ENST00000446375 (DPY19L1-005) 34945683-34973605 protein_coding
ENST00000462134 (DPY19L1-004) 34955329-34988234 processed_transcript
ENST00000463538 (DPY19L1-003) 34973513-35000702 processed_transcript
ENST00000481923 (DPY19L1-002) 35010468-35038271 processed_transcript
ENST00000493989 (DPY19L1-006) 34954546-34955367 retained_intron
ENST00000612226 (DPY19L1-201) 34931400-34939237 protein_coding
ENSG00000189212 (DPY19L2P1)
DPY19L2 pseudogene 1 		ENST00000436258 (DPY19L2P1-002) 35089844-35107734 processed_transcript
ENST00000454445 (DPY19L2P1-001) 35081593-35186041 transcribed_unprocessed_pseudogene
ENST00000458672 (DPY19L2P1-003) 35079989-35162075 processed_transcript
ENSG00000226063 (AC009531.2)
 ENST00000442323 (AC009531.2-001) 35258381-35259729 lincRNA
ENSG00000236592 (S100A11P2)
S100 calcium binding protein A11 pseudogene 2 		ENST00000467589 (S100A11P2-001) 35169224-35169535 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00091I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs466 VISTA 10090 9:24448244-25049108
GeneTranscriptPositionBiotype
ENSMUSG00000031965 (Tbx20)
T-box 20 		ENSMUST00000052946 (Tbx20-201) 24720812-24774303 protein_coding
ENSMUST00000166018 (Tbx20-202) 24740256-24774303 protein_coding
ENSMUSG00000043067 (Dpy19l1)
dpy-19-like 1 (C. elegans) 		ENSMUST00000115277 (Dpy19l1-001) 24411776-24487914 protein_coding
ENSMUST00000129048 (Dpy19l1-005) 24481977-24497172 processed_transcript
ENSMUST00000142064 (Dpy19l1-002) 24411778-24503140 protein_coding
ENSMUST00000149001 (Dpy19l1-004) 24422289-24426418 retained_intron
ENSMUST00000152480 (Dpy19l1-003) 24412051-24423959 retained_intron
ENSMUST00000170356 (Dpy19l1-201) 24411803-24503140 protein_coding
ENSMUSG00000047995 (Cypt4)
cysteine-rich perinuclear theca 4 		ENSMUST00000053956 (Cypt4-201) 24625185-24625827 protein_coding
ENSMUSG00000085576 (Dpy19l2)
dpy-19-like 2 (C. elegans) 		ENSMUST00000133010 (Dpy19l2-201) 24557048-24696293 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00091I_0001ENSG00000164532ENST00000408931ENST00000492961ENSG00000173852ENST00000310974ENST00000428054ENST00000446375ENST00000462134ENST00000463538ENST00000481923ENST00000493989ENST00000612226ENSG00000189212ENST00000436258ENST00000454445ENST00000458672ENSG00000226063ENST00000442323ENSG00000236592ENST00000467589CIL_00091I_0002ENSMUSG00000031965ENSMUST00000052946ENSMUST00000166018ENSMUSG00000043067ENSMUST00000115277ENSMUST00000129048ENSMUST00000142064ENSMUST00000149001ENSMUST00000152480ENSMUST00000170356ENSMUSG00000047995ENSMUST00000053956ENSMUSG00000085576ENSMUST00000133010
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00091I_0001ENSG00000164532ENST00000408931ENST00000492961ENSG00000173852ENST00000310974ENST00000612226ENSG00000189212ENST00000436258ENST00000454445ENST00000458672ENSG00000226063ENST00000442323ENSG00000236592ENST00000467589CIL_00091I_0002ENSMUSG00000031965ENSMUST00000052946ENSMUST00000166018ENSMUSG00000043067ENSMUST00000115277ENSMUST00000142064ENSMUST00000152480ENSMUST00000170356ENSMUSG00000047995ENSMUST00000053956ENSMUSG00000085576ENSMUST00000133010
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164532 ENST00000408931 N/A N/A N/A N/A N/A N/A 3.811±1.42 N/A 0.024±0.00 N/A N/A N/A 0.429±0.30 0.319±0.08
ENST00000492961 N/A N/A N/A N/A N/A N/A 1.702±0.00 N/A 0.658±0.65 0.270±0.00 N/A N/A 0.280±0.13 N/A
ENSG00000173852 ENST00000310974 2.299±0.00 2.310±0.00 N/A 5.968±0.00 1.333±0.00 1.849±0.00 2.832±0.76 1.468±0.00 1.555±0.00 2.450±0.00 0.289±0.19 1.361±0.81 5.928±3.44 10.060±3.99
ENST00000428054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.181±0.00 N/A N/A N/A
ENSG00000189212 ENST00000436258 0.149±0.00 0.226±0.00 1.658±0.00 0.976±0.63 0.364±0.00 0.355±0.27 4.050±1.26 0.359±0.27 1.122±0.00 0.161±0.13 0.149±0.13 0.723±0.66 0.086±0.02 2.493±1.89
ENST00000454445 N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A 0.031±0.00 2.069±0.00
ENST00000458672 N/A N/A N/A 0.103±0.00 N/A 0.019±0.00 1.244±0.00 N/A N/A N/A N/A N/A 0.085±0.00 3.976±3.12
ENSG00000226063 ENST00000442323 N/A N/A N/A N/A N/A N/A 0.194±0.00 N/A N/A N/A N/A N/A 0.131±0.00 N/A
ENSG00000236592 ENST00000467589 N/A N/A N/A 0.235±0.00 N/A N/A 0.816±0.00 0.335±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031965 ENSMUST00000052946 0.016±0.00 5.019±0.48 6.144±0.05 0.276±0.15 0.006±0.00 N/A 19.635±1.34 0.029±0.02 0.570±0.07 1.141±0.27 0.011±0.00 0.024±0.02 2.120±1.81 0.011±0.01
ENSMUST00000166018 N/A N/A N/A N/A N/A N/A N/A 0.025±0.02 N/A N/A N/A 0.011±0.00 N/A N/A
ENSMUSG00000043067 ENSMUST00000115277 N/A 11.738±0.00 N/A N/A N/A 1.563±0.00 N/A N/A 3.361±0.28 1.712±0.00 N/A 5.855±2.02 N/A N/A
ENSMUST00000129048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142064 3.209±0.48 9.827±0.00 5.241±0.09 11.590±4.11 4.728±1.97 N/A 1.138±0.15 1.449±0.17 6.134±2.19 2.130±0.49 0.481±0.06 6.920±2.90 3.477±1.05 5.422±1.71
ENSMUST00000149001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152480 N/A N/A N/A 3.425±0.70 N/A N/A N/A N/A N/A 0.876±0.00 N/A N/A N/A N/A
ENSMUST00000170356 6.273±1.44 N/A 3.080±0.37 3.981±0.19 5.066±0.45 N/A 1.358±0.17 1.656±0.09 5.178±2.95 3.033±0.88 0.417±0.11 5.991±1.18 4.832±4.27 2.678±0.63
ENSMUSG00000047995 ENSMUST00000053956 N/A N/A N/A 0.058±0.00 N/A N/A 0.069±0.00 0.076±0.00 N/A N/A N/A N/A 0.010±0.00 247.023±9.32
ENSMUSG00000085576 ENSMUST00000133010 N/A N/A 0.258±0.06 0.081±0.04 0.017±0.00 N/A 0.019±0.01 0.019±0.01 0.019±0.01 0.099±0.03 N/A 0.092±0.07 0.052±0.04 39.940±13.47

Loading