C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133159 Mrpl38-004 ENSMUSG00000020775 10090 - 11:116132785-116138789 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000133159
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000133159 8.705±1.79 25.321±7.19 4.195±0.02 13.537±8.96 6.949±1.39 8.550±1.93 5.996±0.00 4.590±0.00 6.653±0.84 9.210±6.19 12.317±8.15 11.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_0003KG CIL_0003KG_0003 CGP 11:116121846-116138868

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309352 MRPL38-001 protein_coding Homo_sapiens 0 473
ENST00000410030 MRPL38-002 processed_transcript Homo_sapiens 0 298
ENST00000461602 MRPL38-004 retained_intron Homo_sapiens 0 296
ENST00000464758 MRPL38-003 retained_intron Homo_sapiens 0 296
ENST00000474548 MRPL38-007 retained_intron Homo_sapiens 0 239
ENST00000477736 MRPL38-009 retained_intron Homo_sapiens 0 379
ENST00000493104 MRPL38-005 retained_intron Homo_sapiens 0 396
ENST00000493383 MRPL38-006 retained_intron Homo_sapiens 0 379
ENST00000494179 MRPL38-008 retained_intron Homo_sapiens 0 239
ENST00000585475 MRPL38-016 processed_transcript Homo_sapiens 0 287
ENST00000590947 RP11-552F3.12-002 nonsense_mediated_decay Homo_sapiens 0 473
ENST00000593156 RP11-552F3.12-001 retained_intron Homo_sapiens 0 473

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