C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transformation related protein 73
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133533 Trp73-002 ENSMUSG00000029026 10090 - 4:154056253-154097173 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaENSMUST00000133533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta
ENSMUST00000133533 0.005±0.00 0.008±0.00 0.008±0.00 0.558±0.08 0.108±0.04 0.087±0.00 0.008±0.00 0.011±0.00 0.012±0.00 0.328±0.17 0.011±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IBA negative regulation of transcription from RNA polymerase II promoter
GO:0000785 IBA chromatin
GO:0001836 IDA release of cytochrome c from mitochondria
GO:0002039 IPI p53 binding
GO:0003677 IDA DNA binding
GO:0003682 IBA chromatin binding
GO:0003684 IBA damaged DNA binding
GO:0003690 IBA double-stranded DNA binding
GO:0003700 ISO sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IBA transcription factor complex
GO:0005829 IBA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006954 IMP inflammatory response
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0006978 IBA DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0007050 IDA cell cycle arrest
GO:0007346 ISO regulation of mitotic cell cycle
GO:0009791 IMP post-embryonic development
GO:0010165 IBA response to X-ray
GO:0010332 IBA response to gamma radiation
GO:0010468 ISO regulation of gene expression
GO:0021766 IMP hippocampus development
GO:0030900 IMP forebrain development
GO:0031571 IBA mitotic G1 DNA damage checkpoint
GO:0033326 IMP cerebrospinal fluid secretion
GO:0034644 IBA cellular response to UV
GO:0042771 IBA:ISS intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043508 IDA negative regulation of JUN kinase activity
GO:0043523 IGI regulation of neuron apoptotic process
GO:0043524 IDA negative regulation of neuron apoptotic process
GO:0043565 IBA sequence-specific DNA binding
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045793 IMP positive regulation of cell size
GO:0045893 ISO positive regulation of transcription, DNA-templated
GO:0045944 IBA:ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0048546 IMP digestive tract morphogenesis
GO:0048666 IMP neuron development
GO:0051262 IEA protein tetramerization
GO:0060044 ISO negative regulation of cardiac muscle cell proliferation
GO:1902167 IGI positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:2001235 IGI positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346387 TP73-201 protein_coding Homo_sapiens 0 1147
ENST00000354437 TP73-002 protein_coding Homo_sapiens 0 1452
ENST00000357733 TP73-202 protein_coding Homo_sapiens 0 1149
ENST00000378280 TP73-005 protein_coding Homo_sapiens 0 1314
ENST00000378285 TP73-004 protein_coding Homo_sapiens 0 1616
ENST00000378288 TP73-003 protein_coding Homo_sapiens 0 2074
ENST00000378290 TP73-007 protein_coding Homo_sapiens 0 1908
ENST00000378295 TP73-001 protein_coding Homo_sapiens 0 1908
ENST00000603362 TP73-012 protein_coding Homo_sapiens 0 1149
ENST00000603364 TP73-009 retained_intron Homo_sapiens 0 1284
ENST00000604074 TP73-006 protein_coding Homo_sapiens 0 1151
ENST00000604479 TP73-013 protein_coding Homo_sapiens 0 1147
ENST00000604566 TP73-011 retained_intron Homo_sapiens 0 597

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