C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: YY1 associated factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133736 Yaf2-002 ENSMUSG00000022634 10090 - 15:93284281-93336935 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000133736
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133736 10.665±0.86 20.386±6.63 10.029±1.85 9.736±2.67 7.979±3.82 6.345±1.00 3.896±0.76 6.571±0.50 4.574±0.89 10.814±1.30 5.622±0.51 11.875±6.02 4.198±2.65 1.410±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R1 CIL_0006R1_0002 CGP 15:93239742-93336935
CIL_000468 CIL_000468_0002 CGP 15:93284278-93398334

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327791 YAF2-004 protein_coding Homo_sapiens 0 1443
ENST00000380790 YAF2-002 protein_coding Homo_sapiens 0 1068
ENST00000534854 YAF2-001 protein_coding Homo_sapiens 0 1142
ENST00000541702 YAF2-008 processed_transcript Homo_sapiens 0 250
ENST00000546726 YAF2-015 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000546782 YAF2-009 retained_intron Homo_sapiens 0 211
ENST00000547254 YAF2-005 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000547351 YAF2-016 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000547724 YAF2-011 processed_transcript Homo_sapiens 0 213
ENST00000548917 YAF2-010 protein_coding Homo_sapiens 0 211
ENST00000550315 YAF2-018 retained_intron Homo_sapiens 0 846
ENST00000551268 YAF2-007 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000552109 YAF2-003 nonsense_mediated_decay Homo_sapiens 0 662
ENST00000552928 YAF2-012 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000555248 YAF2-201 protein_coding Homo_sapiens 0 250

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