C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serologically defined colon cancer antigen 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133737 Sdccag3-004 ENSMUSG00000026927 10090 - 2:26386655-26389306 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonOvaryPlacentaENSMUST00000133737
Transcript ID Adrenal Brain Colon Ovary Placenta
ENSMUST00000133737 25.496±5.09 14.036±0.00 10.464±0.00 23.531±0.00 9.576±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E3 CIL_0002E3_0003 CGP 2:26362765-26389316
CIL_00034J CIL_00034J_0002 CGP 2:26382802-26397122

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298537 SDCCAG3-001 protein_coding Homo_sapiens 0 252
ENST00000326105 SDCCAG3P2-001 processed_pseudogene Homo_sapiens 0 278
ENST00000357365 SDCCAG3-002 protein_coding Homo_sapiens 0 549
ENST00000446833 SDCCAG3-006 protein_coding Homo_sapiens 0 211

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