C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | excision repaiross-complementing rodent repair deficiency, complementation group 8 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000133957  |
Ercc8-010 |
ENSMUSG00000021694 |
10090 | + |
13:108158803-108183921  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004LG | CIL_0004LG_0002 | CGP | 13:108052590-108195364 |
| CIL_0001YO | CIL_0001YO_0002 | CGP | 13:108158731-108287105 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0009411 | IMP | response to UV |
| GO:0010165 | IMP | response to X-ray |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000265038
|
ERCC8-001 | protein_coding | Homo_sapiens | 0 | 470 |
|
ENST00000381118
|
ERCC8-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 470 |
|
ENST00000439176
|
ERCC8-005 | protein_coding | Homo_sapiens | 0 | 412 |
|
ENST00000462279
|
ERCC8-004 | processed_transcript | Homo_sapiens | 0 | 302 |
|
ENST00000477893
|
ERCC8-006 | retained_intron | Homo_sapiens | 3.00018e-42 | 176 |
|
ENST00000484330
|
ERCC8-007 | processed_transcript | Homo_sapiens | 0 | 255 |
|
ENST00000495985
|
ERCC8-008 | processed_transcript | Homo_sapiens | 0 | 451 |
|
ENST00000497892
|
ERCC8-002 | retained_intron | Homo_sapiens | 0 | 383 |
