C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004LG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069286-ENSDARG00000069283 CGP 7955 8:17252234-17276685
GeneTranscriptPositionBiotype
ENSDARG00000069283 (ercc8)
excision repair cross-complementing rodent repair deficiency, complementation group 8 		ENSDART00000100698 (ercc8-001) 17257721-17276685 protein_coding
ENSDART00000134253 (ercc8-004) 17263756-17268266 retained_intron
ENSDART00000134265 (ercc8-002) 17257682-17267916 protein_coding
ENSDART00000138395 (ercc8-003) 17263462-17275117 retained_intron
ENSDARG00000069286 (ndufaf2)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2 		ENSDART00000100706 (ndufaf2-001) 17252234-17257604 protein_coding
CIL_0004LG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068184-ENSMUSG00000021694 CGP 10090 13:108052590-108195364
GeneTranscriptPositionBiotype
ENSMUSG00000021694 (Ercc8)
excision repaiross-complementing rodent repair deficiency, complementation group 8 		ENSMUST00000054835 (Ercc8-001) 108158738-108194985 protein_coding
ENSMUST00000120672 (Ercc8-003) 108158738-108174598 protein_coding
ENSMUST00000123138 (Ercc8-009) 108158804-108178664 nonsense_mediated_decay
ENSMUST00000123182 (Ercc8-008) 108158775-108173104 nonsense_mediated_decay
ENSMUST00000123657 (Ercc8-002) 108158731-108195364 nonsense_mediated_decay
ENSMUST00000129117 (Ercc8-004) 108158738-108177248 nonsense_mediated_decay
ENSMUST00000133957 (Ercc8-010) 108158803-108183921 nonsense_mediated_decay
ENSMUST00000137425 (Ercc8-007) 108158738-108163664 retained_intron
ENSMUST00000142931 (Ercc8-006) 108158771-108194977 nonsense_mediated_decay
ENSMUST00000152634 (Ercc8-005) 108158754-108194985 nonsense_mediated_decay
ENSMUSG00000068184 (Ndufaf2)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2 		ENSMUST00000163558 (Ndufaf2-201) 108052590-108158625 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LG_0001ENSDARG00000069283ENSDART00000100698ENSDART00000134253ENSDART00000134265ENSDART00000138395ENSDARG00000069286ENSDART00000100706CIL_0004LG_0002ENSMUSG00000021694ENSMUST00000054835ENSMUST00000120672ENSMUST00000123138ENSMUST00000123182ENSMUST00000123657ENSMUST00000129117ENSMUST00000133957ENSMUST00000137425ENSMUST00000142931ENSMUST00000152634ENSMUSG00000068184ENSMUST00000163558
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LG_0001ENSDARG00000069283ENSDART00000100698ENSDART00000134265ENSDART00000138395ENSDARG00000069286ENSDART00000100706CIL_0004LG_0002ENSMUSG00000021694ENSMUST00000054835ENSMUST00000123138ENSMUST00000123182ENSMUST00000123657ENSMUST00000129117ENSMUST00000142931ENSMUST00000152634ENSMUSG00000068184ENSMUST00000163558
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069283 ENSDART00000100698 N/A N/A N/A 4.313±1.05 N/A N/A 2.937±1.29 2.529±0.77 N/A N/A 0.685±0.00 N/A N/A N/A
ENSDART00000134253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134265 N/A N/A N/A 2.898±0.95 N/A N/A 0.714±0.00 0.792±0.00 N/A N/A 0.538±0.00 N/A N/A N/A
ENSDART00000138395 N/A N/A N/A N/A N/A N/A N/A N/A 0.336±0.00 N/A N/A N/A N/A N/A
ENSDARG00000069286 ENSDART00000100706 N/A N/A N/A 2.865±1.43 N/A N/A 4.217±1.15 2.677±0.09 0.749±0.00 N/A 2.382±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021694 ENSMUST00000054835 2.278±0.68 1.565±0.37 1.322±0.08 5.136±0.03 2.579±0.72 2.671±0.48 1.706±0.45 2.128±0.42 2.565±1.29 3.156±1.30 1.346±0.32 3.622±1.49 2.477±1.25 10.746±4.65
ENSMUST00000120672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.021±0.00 N/A N/A
ENSMUST00000123182 N/A N/A N/A 5.185±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.233±0.93 10.756±0.00
ENSMUST00000123657 0.748±0.00 2.808±0.00 N/A 1.249±0.00 0.458±0.02 0.408±0.00 N/A N/A N/A 1.200±0.00 0.248±0.06 N/A 0.465±0.00 N/A
ENSMUST00000129117 N/A 0.819±0.23 N/A N/A N/A 0.678±0.00 N/A N/A N/A N/A N/A 0.881±0.30 0.289±0.11 0.445±0.00
ENSMUST00000133957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142931 N/A N/A N/A N/A N/A N/A 0.357±0.00 N/A 0.606±0.00 N/A N/A 0.712±0.00 N/A N/A
ENSMUST00000152634 1.342±0.53 0.862±0.40 1.023±0.27 3.188±0.26 1.220±0.32 0.806±0.08 0.686±0.02 1.056±0.27 1.028±0.39 1.205±0.28 0.586±0.00 1.512±0.53 0.981±0.12 4.744±0.26
ENSMUSG00000068184 ENSMUST00000163558 7.901±0.98 5.395±1.53 7.674±0.67 16.915±6.61 3.677±1.85 9.680±1.65 7.909±6.14 14.724±3.67 14.356±5.67 7.262±1.09 7.776±1.36 16.283±29.03 33.384±42.47 141.435±163.79

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