C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134111 Hdac10-005 ENSMUSG00000062906 10090 - 15:89123311-89128679 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000134111
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000134111 3.150±0.96 3.824±0.66 4.273±1.85 5.343±0.94 4.020±0.73 1.176±0.28 1.788±0.50 1.547±0.42 3.704±0.91 3.569±0.85 0.977±0.31 0.680±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000096 CIL_000096_0002 CGP 15:89098357-89128700
CIL_0006L4 CIL_0006L4_0002 CGP 15:89123307-89140703

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216271 HDAC10-001 protein_coding Homo_sapiens 0 889
ENST00000349505 HDAC10-008 protein_coding Homo_sapiens 0 488
ENST00000415993 HDAC10-002 nonsense_mediated_decay Homo_sapiens 0 614
ENST00000448072 HDAC10-005 protein_coding Homo_sapiens 0 488
ENST00000454936 HDAC10-007 nonsense_mediated_decay Homo_sapiens 0 488
ENST00000483222 HDAC10-004 processed_transcript Homo_sapiens 0 202
ENST00000498366 HDAC10-003 processed_transcript Homo_sapiens 0 488

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