C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: limb and neural patterns
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134168 Lnp-007 ENSMUSG00000009207 10090 - 2:74569104-74578894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungOvaryENSMUST00000134168
Transcript ID Adrenal Breast Lung Ovary
ENSMUST00000134168 0.726±0.12 0.853±0.00 1.318±0.00 0.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0002 UCNEbase 2:73834549-75665799
CIL_0001H5 CIL_0001H5_0002 CGP 2:73908447-74579435
CIL_00090A CIL_00090A_0002 VISTA 2:74189927-74791300
CIL_0008JZ CIL_0008JZ_0002 VISTA 2:74350860-74952235
CIL_0001H8 CIL_0001H8_0002 CGP 2:74520291-74659557

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007596 IMP blood coagulation
GO:0032330 IMP regulation of chondrocyte differentiation
GO:0035115 IMP embryonic forelimb morphogenesis
GO:0042733 IGI embryonic digit morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272748 KIAA1715-001 protein_coding Homo_sapiens 0 235
ENST00000392540 KIAA1715-008 protein_coding Homo_sapiens 0 217
ENST00000409660 KIAA1715-002 protein_coding Homo_sapiens 2e-27 128
ENST00000445472 KIAA1715-009 protein_coding Homo_sapiens 0 233
ENST00000466445 KIAA1715-010 processed_transcript Homo_sapiens 6e-28 128
ENST00000483230 KIAA1715-011 processed_transcript Homo_sapiens 2e-28 128
ENST00000544803 KIAA1715-201 protein_coding Homo_sapiens 0 235

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