C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: GAR1 ribonucleoprotein homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134174 Gar1-006 ENSMUSG00000028010 10090 - 3:129824916-129829366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000134174
Transcript ID Placenta
ENSMUST00000134174 9.499±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0001651 ISO dense fibrillar component
GO:0030515 ISO snoRNA binding
GO:0031429 IEA box H/ACA snoRNP complex
GO:0042254 IEA ribosome biogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000226796 GAR1-003 protein_coding Homo_sapiens 0 267
ENST00000394631 GAR1-001 protein_coding Homo_sapiens 0 267
ENST00000503671 GAR1-004 retained_intron Homo_sapiens 3e-29 134
ENST00000506840 GAR1-006 retained_intron Homo_sapiens 0 267

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