C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: limb and neural patterns
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134641 Lnp-002 ENSMUSG00000009207 10090 - 2:74521333-74578931 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000134641
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000134641 1.309±0.65 1.996±0.77 2.186±0.37 2.820±0.41 1.312±0.08 0.762±0.27 2.350±1.70 2.295±0.76 1.575±0.57 2.771±0.71 6.199±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0002 UCNEbase 2:73834549-75665799
CIL_0001H5 CIL_0001H5_0002 CGP 2:73908447-74579435
CIL_00090A CIL_00090A_0002 VISTA 2:74189927-74791300
CIL_0008JZ CIL_0008JZ_0002 VISTA 2:74350860-74952235
CIL_0001H8 CIL_0001H8_0002 CGP 2:74520291-74659557

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272748 KIAA1715-001 protein_coding Homo_sapiens 0 1127
ENST00000392540 KIAA1715-008 protein_coding Homo_sapiens 0 481
ENST00000409660 KIAA1715-002 protein_coding Homo_sapiens 0 1127
ENST00000431754 KIAA1715-005 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000445472 KIAA1715-009 protein_coding Homo_sapiens 0 442
ENST00000466445 KIAA1715-010 processed_transcript Homo_sapiens 6e-28 128
ENST00000475515 KIAA1715-003 processed_transcript Homo_sapiens 0 211
ENST00000479012 KIAA1715-004 retained_intron Homo_sapiens 0 390
ENST00000480788 KIAA1715-007 retained_intron Homo_sapiens 0 327
ENST00000483230 KIAA1715-011 processed_transcript Homo_sapiens 3.00018e-42 174
ENST00000489827 KIAA1715-006 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000544803 KIAA1715-201 protein_coding Homo_sapiens 0 689

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