C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: katanin p60 subunit A-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135029 Katnal2-002 ENSMUSG00000025420 10090 - 18:76977149-77047243 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastKidneyLiverLungMuscleOvaryPlacentaENSMUST00000135029
Transcript ID Adipose Bladder Breast Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000135029 0.140±0.00 0.074±0.00 0.158±0.00 0.037±0.01 0.030±0.01 0.238±0.08 0.071±0.00 0.428±0.32 0.176±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DZ CIL_0008DZ_0002 VISTA 18:76562703-77163723

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245121 KATNAL2-001 protein_coding Homo_sapiens 0 1232
ENST00000356157 KATNAL2-010 protein_coding Homo_sapiens 0 1395
ENST00000585469 KATNAL2-009 protein_coding Homo_sapiens 0 573
ENST00000586198 KATNAL2-007 protein_coding Homo_sapiens 0 398
ENST00000588433 KATNAL2-006 protein_coding Homo_sapiens 0 608
ENST00000591522 KATNAL2-002 protein_coding Homo_sapiens 0 191
ENST00000592005 KATNAL2-008 protein_coding Homo_sapiens 4.99983e-42 176

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