C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135083 Tmem5-003 ENSMUSG00000034620 10090 - 10:122096056-122097126 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverOvaryENSMUST00000135083
Transcript ID Adrenal Breast Colon Liver Ovary
ENSMUST00000135083 6.359±2.72 2.379±0.15 2.639±0.30 1.543±0.34 5.329±1.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YB CIL_0006YB_0002 CGP 10:121780991-122097371

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261234 TMEM5-001 protein_coding Homo_sapiens 3e-34 148
ENST00000536219 TMEM5-006 retained_intron Homo_sapiens 3e-34 148
ENST00000543342 TMEM5-002 nonsense_mediated_decay Homo_sapiens 3e-34 148

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