C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbohydrate (chondroitin 6/keratan) sulfotransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135158 Chst3-201 ENSMUSG00000057337 10090 - 10:60181532-60219260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000135158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000135158 0.458±0.08 0.364±0.10 0.246±0.01 0.516±0.30 4.735±2.53 0.438±0.19 0.326±0.14 1.475±0.17 0.148±0.10 3.586±1.38 0.374±0.39 1.550±0.69 0.054±0.02 0.109±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VS CIL_0007VS_0002 VISTA 10:59667734-60271225

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0006790 IEA sulfur compound metabolic process
GO:0008459 IDA chondroitin 6-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0030206 IMP chondroitin sulfate biosynthetic process
GO:0043029 IMP T cell homeostasis
GO:0050698 IMP proteoglycan sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373115 CHST3-001 protein_coding Homo_sapiens 0 1471

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