C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin G associated kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135225 Gak-002 ENSMUSG00000062234 10090 - 5:108569414-108629739 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLungOvaryENSMUST00000135225
Transcript ID Adipose Adrenal Breast Colon Lung Ovary
ENSMUST00000135225 3.949±1.04 28.135±2.26 7.596±2.75 15.112±3.56 3.794±0.00 5.065±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LS CIL_0006LS_0002 CGP 5:108518554-108629739
CIL_0001Y1 CIL_0001Y1_0002 CGP 5:108569411-108647770

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0007029 IMP endoplasmic reticulum organization
GO:0007030 IMP Golgi organization
GO:0009913 IMP epidermal cell differentiation
GO:0035622 IMP intrahepatic bile duct development
GO:0048468 IMP cell development
GO:0048853 IMP forebrain morphogenesis
GO:0061436 IMP establishment of skin barrier
GO:0072318 IGI clathrin coat disassembly
GO:0072583 IMP clathrin-mediated endocytosis
GO:2000179 IMP positive regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314167 GAK-001 protein_coding Homo_sapiens 0 2523
ENST00000502656 GAK-020 protein_coding Homo_sapiens 0 270
ENST00000502799 GAK-013 retained_intron Homo_sapiens 0 294
ENST00000504668 GAK-024 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000504947 GAK-023 retained_intron Homo_sapiens 0 257
ENST00000505819 GAK-003 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000507124 GAK-017 retained_intron Homo_sapiens 0 248
ENST00000507580 GAK-022 nonsense_mediated_decay Homo_sapiens 5.00264e-43 178
ENST00000507991 GAK-021 retained_intron Homo_sapiens 2.99878e-43 178
ENST00000509566 GAK-008 processed_transcript Homo_sapiens 0 782
ENST00000510022 GAK-014 processed_transcript Homo_sapiens 0 302
ENST00000511163 GAK-002 protein_coding Homo_sapiens 0 2523
ENST00000511229 GAK-015 protein_coding Homo_sapiens 0 303
ENST00000511345 GAK-012 retained_intron Homo_sapiens 0 420
ENST00000511980 GAK-011 protein_coding Homo_sapiens 0 494
ENST00000512325 GAK-019 nonsense_mediated_decay Homo_sapiens 1e-30 137
ENST00000513935 GAK-018 retained_intron Homo_sapiens 0 348
ENST00000515868 GAK-009 retained_intron Homo_sapiens 0 420
ENST00000618573 GAK-201 protein_coding Homo_sapiens 0 715

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