C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin G associated kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000314167 GAK-001 ENSG00000178950 9606 - 4:849278-932298 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000314167
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000314167 14.453±0.00 7.889±0.00 6.811±3.41 8.835±4.43 4.905±1.14 2.008±1.64 8.823±0.00 3.438±0.00 6.801±3.37 1.154±0.00 10.587±8.92 11.173±3.24 23.180±4.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LS CIL_0006LS_0001 CGP 4:784957-932373
CIL_0001Y1 CIL_0001Y1_0001 CGP 4:849276-958656

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005794 IDA Golgi apparatus
GO:0006468 IEA protein phosphorylation
GO:0007029 IEA endoplasmic reticulum organization
GO:0007030 IEA Golgi organization
GO:0007049 IEA cell cycle
GO:0009913 IEA epidermal cell differentiation
GO:0016020 IDA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0030054 IEA cell junction
GO:0035622 IEA intrahepatic bile duct development
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048468 IEA cell development
GO:0048853 IEA forebrain morphogenesis
GO:0061436 IEA establishment of skin barrier
GO:0072318 IEA clathrin coat disassembly
GO:0072583 IEA clathrin-mediated endocytosis
GO:2000179 IEA positive regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046603 Gak-001 protein_coding Mus_musculus 0 3120
ENSMUST00000135225 Gak-002 nonsense_mediated_decay Mus_musculus 0 2523
ENSMUST00000145467 Gak-003 nonsense_mediated_decay Mus_musculus 0 2401
ENSMUST00000137872 Gak-004 retained_intron Mus_musculus 0 2396
ENSMUST00000156110 Gak-005 protein_coding Mus_musculus 0 745
ENSMUST00000139303 Gak-006 nonsense_mediated_decay Mus_musculus 0 484
ENSMUST00000145935 Gak-007 processed_transcript Mus_musculus 0 305

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