C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophosphatidylcholine acyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261407 LPCAT3-001 ENSG00000111684 9606 - 12:6976186-7018510 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyMusclePlacentaENST00000261407
Transcript ID Bladder Brain Kidney Muscle Placenta
ENST00000261407 3.774±0.00 8.082±0.00 33.812±0.00 11.222±5.11 54.174±26.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006644 TAS phospholipid metabolic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0036150 TAS phosphatidylserine acyl-chain remodeling
GO:0036151 TAS phosphatidylcholine acyl-chain remodeling
GO:0036152 TAS phosphatidylethanolamine acyl-chain remodeling
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0047184 IMP 1-acylglycerophosphocholine O-acyltransferase activity
GO:0097006 IEA regulation of plasma lipoprotein particle levels

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004381 Lpcat3-001 protein_coding Mus_musculus 0 1888
ENSMUST00000135516 Lpcat3-002 nonsense_mediated_decay Mus_musculus 0 1315
ENSMUST00000128721 Lpcat3-004 processed_transcript Mus_musculus 0 599
ENSMUST00000130020 Lpcat3-008 processed_transcript Mus_musculus 0 597
ENSMUST00000141546 Lpcat3-006 processed_transcript Mus_musculus 0 466
ENSMUST00000150597 Lpcat3-009 processed_transcript Mus_musculus 0 411
ENSMUST00000133797 Lpcat3-005 retained_intron Mus_musculus 3e-26 124

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