C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lysophosphatidylcholine acyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000535479 LPCAT3-003 ENSG00000111684 9606 - 12:6976186-7018477 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainENST00000535479
Transcript ID Bladder Brain
ENST00000535479 2.592±0.00 1.610±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004381 Lpcat3-001 protein_coding Mus_musculus 0 1258
ENSMUST00000135516 Lpcat3-002 nonsense_mediated_decay Mus_musculus 0 723
ENSMUST00000128721 Lpcat3-004 processed_transcript Mus_musculus 0 599
ENSMUST00000150597 Lpcat3-009 processed_transcript Mus_musculus 0 597
ENSMUST00000141546 Lpcat3-006 processed_transcript Mus_musculus 0 470
ENSMUST00000130020 Lpcat3-008 processed_transcript Mus_musculus 0 411
ENSMUST00000133797 Lpcat3-005 retained_intron Mus_musculus 4e-26 124

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