C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase, AMP-activated, gamma 2 non-catalytic subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135525 Prkag2-010 ENSMUSG00000028944 10090 - 5:24863776-24871753 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonOvaryPlacentaTestisENSMUST00000135525
Transcript ID Brain Breast Colon Ovary Placenta Testis
ENSMUST00000135525 93.203±0.00 12.024±0.00 12.813±0.00 97.645±0.00 41.414±10.80 301.336±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RX CIL_0007RX_0002 VISTA 5:24430554-25031843
CIL_0007T7 CIL_0007T7_0002 VISTA 5:24699254-25303507
CIL_0007T1 CIL_0007T1_0002 VISTA 5:24708595-25311977
CIL_000458 CIL_000458_0002 CGP 5:24802823-25100642

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000129174 prkag2a-201 protein_coding Danio_rerio 0 313
ENSDART00000148618 prkag2a-001 protein_coding Danio_rerio 0 313
ENST00000287878 PRKAG2-001 protein_coding Homo_sapiens 0 780
ENST00000392801 PRKAG2-003 protein_coding Homo_sapiens 0 780
ENST00000418337 PRKAG2-002 protein_coding Homo_sapiens 0 780
ENST00000478989 PRKAG2-015 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000479461 PRKAG2-017 retained_intron Homo_sapiens 0 481
ENST00000485183 PRKAG2-016 retained_intron Homo_sapiens 0 327
ENST00000492843 PRKAG2-004 protein_coding Homo_sapiens 0 780

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