C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immature colon carcinoma transcript 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135619 Ict1-009 ENSMUSG00000018858 10090 + 11:115403782-115410251 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000135619
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000135619 29.304±5.20 17.263±0.00 21.656±0.00 26.069±7.98 13.815±0.00 24.421±6.81 31.343±9.21 13.747±3.04 15.904±0.97 10.749±1.43 22.522±0.00 18.635±0.00 5.428±1.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_00008O CIL_00008O_0002 CGP 11:115381916-115412674

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301585 ICT1-001 protein_coding Homo_sapiens 0 309
ENST00000580800 ICT1-002 nonsense_mediated_decay Homo_sapiens 1e-34 150
ENST00000584208 ICT1-004 protein_coding Homo_sapiens 0 309

Loading