C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | actin related protein 2/3 complex, subunit 1B | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000136074  |
Arpc1b-006 |
ENSMUSG00000029622 |
10090 | + |
5:145123679-145126786  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005L5 | CIL_0005L5_0003 | CGP | 5:145083830-145130705 |
| CIL_0004TJ | CIL_0004TJ_0002 | CGP | 5:145114215-145140238 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IEA | actin binding |
| GO:0005885 | TAS | Arp2/3 protein complex |
| GO:0030833 | IEA | regulation of actin filament polymerization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000252725
|
ARPC1B-001 | protein_coding | Homo_sapiens | 0 | 492 |
|
ENST00000432343
|
ARPC1B-024 | nonsense_mediated_decay | Homo_sapiens | 0 | 285 |
|
ENST00000445924
|
ARPC1B-018 | nonsense_mediated_decay | Homo_sapiens | 0 | 274 |
|
ENST00000451682
|
ARPC1B-003 | protein_coding | Homo_sapiens | 0 | 492 |
|
ENST00000481997
|
ARPC1B-005 | retained_intron | Homo_sapiens | 0 | 361 |
|
ENST00000484375
|
ARPC1B-025 | retained_intron | Homo_sapiens | 0 | 313 |
|
ENST00000491294
|
ARPC1B-006 | retained_intron | Homo_sapiens | 3e-28 | 130 |
