C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005L5_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000008383-ENSDARG00000027063 | CGP | 7955 | 3:40790892-40815394  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000008383  (arpc1a)actin related protein 2/3 complex, subunit 1A |
ENSDART00000014729 (arpc1a-001)
|
40790892-40799237 | protein_coding | |
|
ENSDARG00000027063 (arpc1b) actin related protein 2/3 complex, subunit 1B |
ENSDART00000033713 (arpc1b-001)
|
40803793-40815394 | protein_coding | |
| CIL_0005L5_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000241685-ENSG00000130429 | CGP | 9606 | 7:99325898-99394801 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000106244 (PDAP1) PDGFA associated protein 1 |
ENST00000350498 (PDAP1-001)
|
99394963-99408829 | protein_coding | |
|
ENST00000426447 (PDAP1-002)
|
99396523-99408590 | nonsense_mediated_decay | ||
|
ENST00000488214 (PDAP1-003)
|
99403317-99404942 | retained_intron | ||
|
ENST00000496335 (PDAP1-004)
|
99392048-99397960 | processed_transcript | ||
|
ENSG00000130429 (ARPC1B) actin related protein 2/3 complex, subunit 1B, 41kDa |
ENST00000252725 (ARPC1B-001)
|
99374675-99394801 | protein_coding | |
|
ENST00000414376 (ARPC1B-008)
|
99374259-99388175 | protein_coding | ||
|
ENST00000417330 (ARPC1B-014)
|
99374730-99388261 | protein_coding | ||
|
ENST00000418347 (ARPC1B-013)
|
99374729-99388117 | protein_coding | ||
|
ENST00000427217 (ARPC1B-016)
|
99374730-99388267 | protein_coding | ||
|
ENST00000429246 (ARPC1B-009)
|
99374730-99385778 | protein_coding | ||
|
ENST00000431816 (ARPC1B-015)
|
99374730-99388267 | protein_coding | ||
|
ENST00000432343 (ARPC1B-024)
|
99385700-99391027 | nonsense_mediated_decay | ||
|
ENST00000443222 (ARPC1B-007)
|
99374249-99388195 | protein_coding | ||
|
ENST00000445924 (ARPC1B-018)
|
99385700-99391006 | nonsense_mediated_decay | ||
|
ENST00000451682 (ARPC1B-003)
|
99374730-99394776 | protein_coding | ||
|
ENST00000455009 (ARPC1B-012)
|
99374707-99388255 | protein_coding | ||
|
ENST00000458033 (ARPC1B-017)
|
99374730-99388267 | protein_coding | ||
|
ENST00000463078 (ARPC1B-022)
|
99394042-99394801 | processed_transcript | ||
|
ENST00000468337 (ARPC1B-021)
|
99389094-99389983 | retained_intron | ||
|
ENST00000474880 (ARPC1B-020)
|
99385700-99388956 | processed_transcript | ||
|
ENST00000481997 (ARPC1B-005)
|
99390872-99394794 | retained_intron | ||
|
ENST00000484375 (ARPC1B-025)
|
99374707-99391100 | retained_intron | ||
|
ENST00000484600 (ARPC1B-011)
|
99374730-99390029 | retained_intron | ||
|
ENST00000491294 (ARPC1B-006)
|
99391178-99394797 | retained_intron | ||
|
ENST00000493403 (ARPC1B-019)
|
99386369-99388243 | processed_transcript | ||
|
ENSG00000241685 (ARPC1A) actin related protein 2/3 complex, subunit 1A, 41kDa |
ENST00000262942 (ARPC1A-001)
|
99325910-99366257 | protein_coding | |
|
ENST00000432786 (ARPC1A-009)
|
99325927-99366226 | nonsense_mediated_decay | ||
|
ENST00000441989 (ARPC1A-003)
|
99325898-99388164 | nonsense_mediated_decay | ||
|
ENST00000463009 (ARPC1A-004)
|
99358666-99366214 | processed_transcript | ||
|
ENST00000471960 (ARPC1A-005)
|
99353935-99360242 | processed_transcript | ||
|
ENST00000477240 (ARPC1A-007)
|
99363465-99366262 | retained_intron | ||
| CIL_0005L5_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000029621-ENSMUSG00000029622 | CGP | 10090 | 5:145083830-145130705 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000029621 (Arpc1a) actin related protein 2/3 complex, subunit 1A |
ENSMUST00000031625 (Arpc1a-001)
|
145083830-145108761 | protein_coding | |
|
ENSMUST00000124379 (Arpc1a-004)
|
145084100-145097228 | protein_coding | ||
|
ENSMUST00000127694 (Arpc1a-002)
|
145083906-145108756 | processed_transcript | ||
|
ENSMUST00000134835 (Arpc1a-003)
|
145083884-145096183 | processed_transcript | ||
|
ENSMUST00000142276 (Arpc1a-006)
|
145104273-145108592 | retained_intron | ||
|
ENSMUST00000147564 (Arpc1a-005)
|
145096257-145098928 | retained_intron | ||
|
ENSMUSG00000029622 (Arpc1b) actin related protein 2/3 complex, subunit 1B |
ENSMUST00000085679 (Arpc1b-001)
|
145114215-145129699 | protein_coding | |
|
ENSMUST00000126343 (Arpc1b-004)
|
145114301-145124255 | retained_intron | ||
|
ENSMUST00000128229 (Arpc1b-008)
|
145125891-145127330 | retained_intron | ||
|
ENSMUST00000129033 (Arpc1b-003)
|
145114258-145122795 | processed_transcript | ||
|
ENSMUST00000136074 (Arpc1b-006)
|
145123679-145126786 | protein_coding | ||
|
ENSMUST00000138235 (Arpc1b-007)
|
145123974-145125706 | retained_intron | ||
|
ENSMUST00000138900 (Arpc1b-005)
|
145123974-145126932 | processed_transcript | ||
|
ENSMUST00000138922 (Arpc1b-010)
|
145126758-145130705 | protein_coding | ||
|
ENSMUST00000141602 (Arpc1b-002)
|
145114316-145122635 | protein_coding | ||
|
ENSMUST00000144375 (Arpc1b-009)
|
145127223-145128088 | retained_intron | ||
|
ENSMUSG00000029623 (Pdap1) PDGFA associated protein 1 |
ENSMUST00000031627 (Pdap1-001)
|
145128769-145140238 | protein_coding | |
|
ENSMUST00000123111 (Pdap1-002)
|
145130084-145136696 | processed_transcript | ||
|
ENSMUST00000143439 (Pdap1-004)
|
145131371-145135472 | retained_intron | ||
|
ENSMUST00000148781 (Pdap1-003)
|
145136578-145139998 | retained_intron | ||
Expression Patterns
|
