C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein kinase C, iota
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136086 Prkci-005 ENSMUSG00000037643 10090 + 3:31038450-31041224 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000136086
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000136086 68.039±0.00 99.983±0.00 190.051±1.21 20.699±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XN CIL_0002XN_0002 CGP 3:30899295-31052741
CIL_0002XK CIL_0002XK_0002 CGP 3:30995747-31122577

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0007015 IMP actin filament organization
GO:0008270 IEA zinc ion binding
GO:0016324 IDA apical plasma membrane
GO:0035089 IMP establishment of apical/basal cell polarity
GO:0042462 IMP eye photoreceptor cell development
GO:0045177 IDA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295797 PRKCI-001 protein_coding Homo_sapiens 0 460
ENST00000392722 RP3-514P16.1-001 processed_pseudogene Homo_sapiens 0 444
ENST00000482353 PRKCI-005 retained_intron Homo_sapiens 0 322
ENST00000488541 PRKCI-004 retained_intron Homo_sapiens 2e-20 102
ENST00000493761 PRKCI-003 retained_intron Homo_sapiens 1e-33 147

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