C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin-like 6B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136565 Actl6b-004 ENSMUSG00000029712 10090 + 5:137553539-137565778 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyTestisENSMUST00000136565
Transcript ID Adrenal Breast Colon Heart Kidney Testis
ENSMUST00000136565 1.083±0.50 0.128±0.04 0.366±0.10 0.068±0.00 0.021±0.00 0.058±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006333 IC chromatin assembly or disassembly
GO:0016514 IDA SWI/SNF complex
GO:0071565 IDA nBAF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000160382 ACTL6B-001 protein_coding Homo_sapiens 0 560
ENST00000461605 ACTL6B-002 protein_coding Homo_sapiens 4e-38 161
ENST00000485601 ACTL6B-004 retained_intron Homo_sapiens 0 416
ENST00000487125 ACTL6B-006 retained_intron Homo_sapiens 2e-34 150
ENST00000487225 ACTL6B-003 retained_intron Homo_sapiens 0 261
ENST00000489904 ACTL6B-005 retained_intron Homo_sapiens 8e-39 163

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