C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sex comb on midleg homolog 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136801 Scmh1-003 ENSMUSG00000000085 10090 + 4:120517626-120530184 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000136801
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000136801 7.535±3.82 2.091±0.00 20.004±1.16 6.090±2.59 3.058±0.48 7.558±1.95 4.372±0.26 4.604±0.92 1.841±1.04 4.970±1.17 3.832±0.89 9.325±2.79 1.212±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000876 CIL_000876_0002 VISTA 4:120091603-120693946
CIL_0009C0 CIL_0009C0_0002 VISTA 4:120091667-120696253

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326197 SCMH1-005 protein_coding Homo_sapiens 0 601
ENST00000337495 SCMH1-003 protein_coding Homo_sapiens 0 385
ENST00000361191 SCMH1-201 protein_coding Homo_sapiens 0 385
ENST00000361705 SCMH1-202 protein_coding Homo_sapiens 0 385
ENST00000372595 SCMH1-004 protein_coding Homo_sapiens 0 601
ENST00000372596 SCMH1-002 protein_coding Homo_sapiens 0 385
ENST00000372597 SCMH1-001 protein_coding Homo_sapiens 0 385
ENST00000397171 SCMH1-203 protein_coding Homo_sapiens 0 385
ENST00000397174 SCMH1-204 protein_coding Homo_sapiens 0 601
ENST00000402904 SCMH1-205 protein_coding Homo_sapiens 0 601
ENST00000456518 SCMH1-012 protein_coding Homo_sapiens 0 381
ENST00000460215 SCMH1-010 processed_transcript Homo_sapiens 2.94273e-44 182
ENST00000472037 SCMH1-006 protein_coding Homo_sapiens 0 545
ENST00000498793 SCMH1-008 processed_transcript Homo_sapiens 0 324

Loading