C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTPase activating protein and VPS9 domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137528 Gapvd1-005 ENSMUSG00000026867 10090 - 2:34699870-34728947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000137528
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000137528 6.576±0.00 12.702±0.00 8.867±2.06 7.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LX CIL_0008LX_0002 VISTA 2:34155217-34756803
CIL_00080V CIL_00080V_0002 VISTA 2:34162107-34763282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265956 GAPVD1-201 protein_coding Homo_sapiens 0 2700
ENST00000297933 GAPVD1-015 protein_coding Homo_sapiens 0 2708
ENST00000312123 GAPVD1-003 protein_coding Homo_sapiens 0 1666
ENST00000394083 GAPVD1-016 protein_coding Homo_sapiens 0 1666
ENST00000394084 GAPVD1-005 protein_coding Homo_sapiens 0 1325
ENST00000394104 GAPVD1-202 protein_coding Homo_sapiens 0 2708
ENST00000394105 GAPVD1-012 protein_coding Homo_sapiens 0 2708
ENST00000431329 GAPVD1-009 protein_coding Homo_sapiens 0 3310
ENST00000436712 GAPVD1-011 protein_coding Homo_sapiens 0 1179
ENST00000467750 GAPVD1-001 protein_coding Homo_sapiens 0 2708
ENST00000470056 GAPVD1-002 protein_coding Homo_sapiens 0 2708
ENST00000479511 GAPVD1-010 retained_intron Homo_sapiens 0 233
ENST00000495955 GAPVD1-014 protein_coding Homo_sapiens 0 2708
ENST00000497580 GAPVD1-013 nonsense_mediated_decay Homo_sapiens 0 2471

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