C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcineurin-like EF hand protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137585 Chp1-004 ENSMUSG00000014077 10090 + 2:119566605-119585405 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000137585
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000137585 79.341±0.00 109.032±0.00 226.692±54.24 16.383±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZB CIL_0005ZB_0002 CGP 2:119516505-119587027
CIL_000790 CIL_000790_0002 CGP 2:119547697-119618469

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334660 CHP1-001 protein_coding Homo_sapiens 0 773
ENST00000392151 CHP1-002 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000558351 CHP1-009 processed_transcript Homo_sapiens 0 351
ENST00000560397 CHP1-006 protein_coding Homo_sapiens 0 416
ENST00000560411 CHP1-003 nonsense_mediated_decay Homo_sapiens 0 767
ENST00000560633 CHP1-005 processed_transcript Homo_sapiens 0 411
ENST00000560784 CHP1-008 nonsense_mediated_decay Homo_sapiens 0 322
ENST00000560965 CHP1-004 protein_coding Homo_sapiens 0 407
ENST00000561280 CHP1-007 processed_transcript Homo_sapiens 0 300

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