C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired related homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137924 Prrx2-004 ENSMUSG00000039476 10090 + 2:30879319-30881120 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000137924
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000137924 3.387±1.63 0.505±0.13 3.104±0.74 1.137±0.24 4.159±1.29 1.143±0.28 0.943±0.47 0.194±0.20 0.672±0.12 0.395±0.13 7.251±2.34 0.351±0.23 0.167±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UD CIL_0005UD_0002 CGP 2:30823097-30881251
CIL_0005UC CIL_0005UC_0002 CGP 2:30834972-30929863

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372469 PRRX2-001 protein_coding Homo_sapiens 0 329

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